Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
L083_3203Hypothetical protein. (511 aa)    
Predicted Functional Partners:
L083_3206
Glucose-methanol-choline oxidoreductase.
 
     0.582
L083_3204
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.539
L083_5573
Non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.527
L083_2985
Aminotransferase.
 
   
 0.486
L083_1538
DNA internalization-related competence protein comec/rec2.
  
  
 0.473
L083_3205
Hypothetical protein.
       0.463
L083_5646
ABC transporter.
  
  
 0.422
L083_2786
Carbohydrate-binding protein.
 
   
 0.409
L083_7827
Hypothetical protein.
  
     0.406
L083_5678
Extracellular solute-binding protein family 1.
  
     0.403
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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