STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_3208Wyosine base formation. (263 aa)    
Predicted Functional Partners:
L083_3206
Glucose-methanol-choline oxidoreductase.
 
  
  0.969
L083_3209
Hypothetical protein.
 
  
  0.969
L083_3207
Hypothetical protein.
  
  
  0.957
L083_3213
Cytochrome P450 family protein.
 
  
  0.947
L083_3235
UnbV.
  
  
  0.937
L083_3234
UnbU.
  
  
  0.935
L083_3205
Hypothetical protein.
    
  0.909
pks1C
Polyketide synthase-like protein.
 
     0.697
L083_3194
Hypothetical protein.
  
     0.683
L083_3211
Hypothetical protein.
 
     0.677
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.