STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_3215Helix-turn-helix domain-containing protein. (259 aa)    
Predicted Functional Partners:
L083_2556
AraC family transcriptional regulator.
  
   0.746
L083_3235
UnbV.
  
   
 0.700
L083_3211
Hypothetical protein.
  
     0.693
L083_3209
Hypothetical protein.
  
     0.692
L083_3234
UnbU.
  
     0.692
L083_3207
Hypothetical protein.
  
     0.684
pks1C
Polyketide synthase-like protein.
  
     0.638
L083_3204
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.622
L083_3233
Hypothetical protein.
  
     0.594
L083_1251
AraC family transcription regulator.
  
   0.590
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.