STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_3419Nitroreductase. (340 aa)    
Predicted Functional Partners:
L083_3418
Hypothetical protein.
 
   
0.902
L083_3421
Hypothetical protein.
 
    0.691
L083_3436
Nitroreductase.
 
   
0.586
L083_4732
Hypothetical protein.
 
   
0.577
L083_3417
Polysaccharide deacetylase.
       0.576
L083_0024
CBS domain-containing protein.
   
  
 0.543
L083_5836
Signal-transduction protein.
   
  
 0.543
L083_5077
Peptidase M50; Belongs to the peptidase M50B family.
  
    0.535
L083_3423
CBS domain containing membrane protein.
 
     0.500
L083_3416
ABC transporter-like protein.
  
    0.466
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.