Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L083_0591 | L083_3660 | L083_0591 | L083_3660 | Hypothetical protein. | FG-GAP repeat domain-containing protein. | 0.420 |
L083_0703 | L083_3660 | L083_0703 | L083_3660 | Hypothetical protein. | FG-GAP repeat domain-containing protein. | 0.512 |
L083_3657 | L083_3658 | L083_3657 | L083_3658 | Radical SAM domain-containing protein. | Glycoside hydrolase family protein. | 0.568 |
L083_3657 | L083_3660 | L083_3657 | L083_3660 | Radical SAM domain-containing protein. | FG-GAP repeat domain-containing protein. | 0.437 |
L083_3657 | sprD | L083_3657 | L083_3659 | Radical SAM domain-containing protein. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.568 |
L083_3658 | L083_3657 | L083_3658 | L083_3657 | Glycoside hydrolase family protein. | Radical SAM domain-containing protein. | 0.568 |
L083_3658 | L083_3660 | L083_3658 | L083_3660 | Glycoside hydrolase family protein. | FG-GAP repeat domain-containing protein. | 0.523 |
L083_3658 | L083_3661 | L083_3658 | L083_3661 | Glycoside hydrolase family protein. | SARP family transcriptional regulator. | 0.400 |
L083_3658 | sprD | L083_3658 | L083_3659 | Glycoside hydrolase family protein. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.773 |
L083_3660 | L083_0591 | L083_3660 | L083_0591 | FG-GAP repeat domain-containing protein. | Hypothetical protein. | 0.420 |
L083_3660 | L083_0703 | L083_3660 | L083_0703 | FG-GAP repeat domain-containing protein. | Hypothetical protein. | 0.512 |
L083_3660 | L083_3657 | L083_3660 | L083_3657 | FG-GAP repeat domain-containing protein. | Radical SAM domain-containing protein. | 0.437 |
L083_3660 | L083_3658 | L083_3660 | L083_3658 | FG-GAP repeat domain-containing protein. | Glycoside hydrolase family protein. | 0.523 |
L083_3660 | L083_3661 | L083_3660 | L083_3661 | FG-GAP repeat domain-containing protein. | SARP family transcriptional regulator. | 0.572 |
L083_3660 | L083_4344 | L083_3660 | L083_4344 | FG-GAP repeat domain-containing protein. | ATP-binding protein. | 0.419 |
L083_3660 | sprD | L083_3660 | L083_3659 | FG-GAP repeat domain-containing protein. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.540 |
L083_3661 | L083_3658 | L083_3661 | L083_3658 | SARP family transcriptional regulator. | Glycoside hydrolase family protein. | 0.400 |
L083_3661 | L083_3660 | L083_3661 | L083_3660 | SARP family transcriptional regulator. | FG-GAP repeat domain-containing protein. | 0.572 |
L083_3661 | sprD | L083_3661 | L083_3659 | SARP family transcriptional regulator. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.401 |
L083_4344 | L083_3660 | L083_4344 | L083_3660 | ATP-binding protein. | FG-GAP repeat domain-containing protein. | 0.419 |
page 1 of 2