STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmKABC transporter-like protein; Belongs to the ABC transporter superfamily. (354 aa)    
Predicted Functional Partners:
L083_4174
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
 0.970
L083_3184
Binding-protein-dependent transport systems inner membrane component.
 
 0.954
L083_5587
Binding-protein-dependent transport systems inner membrane component.
 
 0.943
L083_3183
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.942
L083_4107
Binding-protein-dependent transporters inner membrane component.
 
 0.939
L083_6980
Binding-protein-dependent transport system inner membrane protein.
 
 0.939
L083_5582
Binding-protein-dependent transport systems inner membrane component.
 
 0.936
L083_4106
ABC transporter permease.
 
 0.935
L083_4638
Binding-protein-dependent transport systems inner membrane component.
 
 0.934
L083_5588
Binding-protein-dependent transport systems inner membrane component.
 
 0.934
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.