Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L083_5301 | L083_5302 | L083_5301 | L083_5302 | Hypothetical protein. | Hypothetical protein. | 0.963 |
L083_5301 | pitH | L083_5301 | L083_5303 | Hypothetical protein. | Putative low-affinity phosphate transport protein. | 0.862 |
L083_5302 | L083_5301 | L083_5302 | L083_5301 | Hypothetical protein. | Hypothetical protein. | 0.963 |
L083_5302 | pitH | L083_5302 | L083_5303 | Hypothetical protein. | Putative low-affinity phosphate transport protein. | 0.882 |
L083_7770 | pitH | L083_7770 | L083_5303 | Hypothetical protein. | Putative low-affinity phosphate transport protein. | 0.939 |
cysG | gltB | L083_1438 | L083_2092 | uroporphyrin-III C-methyltransferase. | Glutamate synthase. | 0.732 |
cysG | pitH | L083_1438 | L083_5303 | uroporphyrin-III C-methyltransferase. | Putative low-affinity phosphate transport protein. | 0.629 |
cysG | sat1 | L083_1438 | L083_1069 | uroporphyrin-III C-methyltransferase. | Adenylylsulfate kinase. | 0.991 |
gltB | cysG | L083_2092 | L083_1438 | Glutamate synthase. | uroporphyrin-III C-methyltransferase. | 0.732 |
gltB | phoU | L083_2092 | L083_7664 | Glutamate synthase. | Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake. | 0.731 |
gltB | pitH | L083_2092 | L083_5303 | Glutamate synthase. | Putative low-affinity phosphate transport protein. | 0.593 |
gltB | pstB | L083_2092 | L083_7764 | Glutamate synthase. | Phosphate ABC transporter ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.687 |
gltB | sat1 | L083_2092 | L083_1069 | Glutamate synthase. | Adenylylsulfate kinase. | 0.763 |
phoU | gltB | L083_7664 | L083_2092 | Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake. | Glutamate synthase. | 0.731 |
phoU | pitH | L083_7664 | L083_5303 | Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake. | Putative low-affinity phosphate transport protein. | 0.476 |
phoU | pstB | L083_7664 | L083_7764 | Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake. | Phosphate ABC transporter ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.991 |
phoU | pstS | L083_7664 | L083_7761 | Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake. | Phosphate ABC transporter periplasmic phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.909 |
pitH | L083_5301 | L083_5303 | L083_5301 | Putative low-affinity phosphate transport protein. | Hypothetical protein. | 0.862 |
pitH | L083_5302 | L083_5303 | L083_5302 | Putative low-affinity phosphate transport protein. | Hypothetical protein. | 0.882 |
pitH | L083_7770 | L083_5303 | L083_7770 | Putative low-affinity phosphate transport protein. | Hypothetical protein. | 0.939 |
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