STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_6793Phosphoesterase PA-phosphatase-like protein. (289 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.742
L083_1138
Hypothetical protein.
  
     0.650
L083_0038
Helix-turn-helix domain-containing protein.
 
     0.571
L083_8184
Hypothetical protein.
  
     0.567
L083_1927
Hypothetical protein.
  
     0.560
L083_4201
Putative integral membrane protein.
  
     0.554
pepR
Peptidase M16 domain-containing protein; Belongs to the peptidase M16 family.
       0.542
gpsI
Guanosine pentaphosphate synthetase i/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
    0.542
L083_4829
Hypothetical protein.
  
     0.533
nrps1B
Glutamate-1-semialdehyde 2,1-aminomutase, Phenylalanine racemase (ATP-hydrolyzing).
  
 0.530
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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