STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_7269Peptidase M16. (439 aa)    
Predicted Functional Partners:
L083_7268
Peptidase M16 domain-containing protein.
     0.997
L083_6951
Peptidase m16 domain-containing protein.
     0.972
nudC
Nudix hydrolase.
  
    0.916
qcrB
Cytochrome b/b6 domain protein.
    
 0.830
qcrA
Rieske (2Fe-2S) domain-containing protein.
   
 0.825
L083_2138
Rieske (2Fe-2S) iron-sulfur domain-containing protein.
   
 0.825
nuoG
NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.811
nuoE
NADH dehydrogenase subunit E.
   
 
 0.796
L083_0423
NADH-quinone oxidoreductase, f subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.730
L083_5241
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
   
 
 0.730
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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