Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L083_1630 | L083_2855 | L083_1630 | L083_2855 | Sensory histidine protein kinase. | Integral membrane sensor signal transduction histidine kinase. | 0.460 |
L083_1630 | L083_2929 | L083_1630 | L083_2929 | Sensory histidine protein kinase. | Multi-sensor hybrid histidine kinase. | 0.996 |
L083_1630 | L083_3035 | L083_1630 | L083_3035 | Sensory histidine protein kinase. | Two-component hybrid sensor and regulator. | 0.969 |
L083_1630 | L083_3036 | L083_1630 | L083_3036 | Sensory histidine protein kinase. | Response regulator receiver protein. | 0.998 |
L083_1630 | L083_4667 | L083_1630 | L083_4667 | Sensory histidine protein kinase. | Two-component system sensor kinase. | 0.493 |
L083_1630 | L083_7662 | L083_1630 | L083_7662 | Sensory histidine protein kinase. | Two component transcriptional regulator. | 0.872 |
L083_1630 | L083_7663 | L083_1630 | L083_7663 | Sensory histidine protein kinase. | Histidine kinase. | 0.489 |
L083_1630 | etr1 | L083_1630 | L083_3247 | Sensory histidine protein kinase. | Integral membrane sensor signal transduction histidine kinase. | 0.456 |
L083_1630 | etr2 | L083_1630 | L083_3910 | Sensory histidine protein kinase. | Histidine kinase. | 0.466 |
L083_1630 | srrB | L083_1630 | L083_8124 | Sensory histidine protein kinase. | ATP-binding protein. | 0.816 |
L083_2855 | L083_1630 | L083_2855 | L083_1630 | Integral membrane sensor signal transduction histidine kinase. | Sensory histidine protein kinase. | 0.460 |
L083_2855 | L083_2929 | L083_2855 | L083_2929 | Integral membrane sensor signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.911 |
L083_2855 | L083_3035 | L083_2855 | L083_3035 | Integral membrane sensor signal transduction histidine kinase. | Two-component hybrid sensor and regulator. | 0.449 |
L083_2855 | L083_3036 | L083_2855 | L083_3036 | Integral membrane sensor signal transduction histidine kinase. | Response regulator receiver protein. | 0.841 |
L083_2855 | L083_7662 | L083_2855 | L083_7662 | Integral membrane sensor signal transduction histidine kinase. | Two component transcriptional regulator. | 0.800 |
L083_2855 | srrB | L083_2855 | L083_8124 | Integral membrane sensor signal transduction histidine kinase. | ATP-binding protein. | 0.782 |
L083_2929 | L083_1630 | L083_2929 | L083_1630 | Multi-sensor hybrid histidine kinase. | Sensory histidine protein kinase. | 0.996 |
L083_2929 | L083_2855 | L083_2929 | L083_2855 | Multi-sensor hybrid histidine kinase. | Integral membrane sensor signal transduction histidine kinase. | 0.911 |
L083_2929 | L083_3035 | L083_2929 | L083_3035 | Multi-sensor hybrid histidine kinase. | Two-component hybrid sensor and regulator. | 0.996 |
L083_2929 | L083_3036 | L083_2929 | L083_3036 | Multi-sensor hybrid histidine kinase. | Response regulator receiver protein. | 0.998 |
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