Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3737_02825 | C3737_21570 | GCA_000813485_00771 | GCA_000813485_00005 | Unannotated protein. | Unannotated protein. | 0.461 |
C3737_02825 | C3737_21675 | GCA_000813485_00771 | GCA_000813485_00025 | Unannotated protein. | Unannotated protein. | 0.468 |
C3737_02825 | ftsQ | GCA_000813485_00771 | GCA_000813485_00905 | Unannotated protein. | Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.590 |
C3737_02825 | smg | GCA_000813485_00771 | GCA_000813485_02638 | Unannotated protein. | Unannotated protein; Belongs to the Smg family. | 0.430 |
C3737_02825 | zapD | GCA_000813485_00771 | GCA_000813485_00914 | Unannotated protein. | Unannotated protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.680 |
C3737_14185 | C3737_21675 | GCA_000813485_00888 | GCA_000813485_00025 | Unannotated protein. | Unannotated protein. | 0.506 |
C3737_14185 | ftsB | GCA_000813485_00888 | GCA_000813485_01955 | Unannotated protein. | Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.748 |
C3737_14185 | ftsQ | GCA_000813485_00888 | GCA_000813485_00905 | Unannotated protein. | Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.752 |
C3737_14185 | lpxH | GCA_000813485_00888 | GCA_000813485_04163 | Unannotated protein. | Unannotated protein; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.706 |
C3737_14185 | mreD | GCA_000813485_00888 | GCA_000813485_02288 | Unannotated protein. | Unannotated protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.512 |
C3737_14185 | recO | GCA_000813485_00888 | GCA_000813485_01936 | Unannotated protein. | Unannotated protein; Involved in DNA repair and RecF pathway recombination. | 0.559 |
C3737_21570 | C3737_02825 | GCA_000813485_00005 | GCA_000813485_00771 | Unannotated protein. | Unannotated protein. | 0.461 |
C3737_21570 | C3737_21675 | GCA_000813485_00005 | GCA_000813485_00025 | Unannotated protein. | Unannotated protein. | 0.686 |
C3737_21570 | mreD | GCA_000813485_00005 | GCA_000813485_02288 | Unannotated protein. | Unannotated protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.492 |
C3737_21675 | C3737_02825 | GCA_000813485_00025 | GCA_000813485_00771 | Unannotated protein. | Unannotated protein. | 0.468 |
C3737_21675 | C3737_14185 | GCA_000813485_00025 | GCA_000813485_00888 | Unannotated protein. | Unannotated protein. | 0.506 |
C3737_21675 | C3737_21570 | GCA_000813485_00025 | GCA_000813485_00005 | Unannotated protein. | Unannotated protein. | 0.686 |
C3737_21675 | ftsB | GCA_000813485_00025 | GCA_000813485_01955 | Unannotated protein. | Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.455 |
C3737_21675 | ftsQ | GCA_000813485_00025 | GCA_000813485_00905 | Unannotated protein. | Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.623 |
C3737_21675 | lpxH | GCA_000813485_00025 | GCA_000813485_04163 | Unannotated protein. | Unannotated protein; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.449 |
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