STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813485_00263Unannotated protein. (399 aa)    
Predicted Functional Partners:
C3737_03950
Unannotated protein.
    
 0.883
pheA
Unannotated protein.
 
  
 0.730
C3737_14895
Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
  
  0.724
C3737_09980
Unannotated protein; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
  
  0.697
nuoC
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
  0.695
C3737_09695
Unannotated protein.
  
     0.677
C3737_20320
Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.672
hutH
Unannotated protein.
     
 0.665
C3737_20645
Unannotated protein.
     
 0.665
gcvP
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.664
Your Current Organism:
Aeromonas jandaei
NCBI taxonomy Id: 650
Other names: A. jandaei, ATCC 49568, CCUG 29543, CCUG 30353, CDC 0787-80, CECT 4228, CIP 104171, DSM 7311, JCM 8316, LMG 12221, LMG:12221, genospecies DNA group 9 A. sobria
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