Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3737_03165 | C3737_03950 | GCA_000813485_00825 | GCA_000813485_03501 | Unannotated protein. | Unannotated protein. | 0.436 |
C3737_03165 | C3737_18490 | GCA_000813485_00825 | GCA_000813485_00093 | Unannotated protein. | Unannotated protein. | 0.633 |
C3737_03165 | fur | GCA_000813485_00825 | GCA_000813485_00809 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.706 |
C3737_03165 | trxA | GCA_000813485_00825 | GCA_000813485_00020 | Unannotated protein. | Unannotated protein; Belongs to the thioredoxin family. | 0.631 |
C3737_03950 | C3737_03165 | GCA_000813485_03501 | GCA_000813485_00825 | Unannotated protein. | Unannotated protein. | 0.436 |
C3737_03950 | ahpC | GCA_000813485_03501 | GCA_000813485_03302 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.436 |
C3737_03950 | fur | GCA_000813485_03501 | GCA_000813485_00809 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.904 |
C3737_03950 | rpoB | GCA_000813485_03501 | GCA_000813485_02684 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.473 |
C3737_03950 | rpoC | GCA_000813485_03501 | GCA_000813485_02683 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.560 |
C3737_03950 | trxA | GCA_000813485_03501 | GCA_000813485_00020 | Unannotated protein. | Unannotated protein; Belongs to the thioredoxin family. | 0.776 |
C3737_18490 | C3737_03165 | GCA_000813485_00093 | GCA_000813485_00825 | Unannotated protein. | Unannotated protein. | 0.633 |
C3737_18490 | ahpC | GCA_000813485_00093 | GCA_000813485_03302 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.633 |
C3737_18490 | fur | GCA_000813485_00093 | GCA_000813485_00809 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.695 |
ahpC | C3737_03950 | GCA_000813485_03302 | GCA_000813485_03501 | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Unannotated protein. | 0.436 |
ahpC | C3737_18490 | GCA_000813485_03302 | GCA_000813485_00093 | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Unannotated protein. | 0.633 |
ahpC | fur | GCA_000813485_03302 | GCA_000813485_00809 | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Unannotated protein; Belongs to the Fur family. | 0.706 |
ahpC | trxA | GCA_000813485_03302 | GCA_000813485_00020 | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Unannotated protein; Belongs to the thioredoxin family. | 0.702 |
fur | C3737_03165 | GCA_000813485_00809 | GCA_000813485_00825 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.706 |
fur | C3737_03950 | GCA_000813485_00809 | GCA_000813485_03501 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.904 |
fur | C3737_18490 | GCA_000813485_00809 | GCA_000813485_00093 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.695 |
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