STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813485_01891Unannotated protein. (386 aa)    
Predicted Functional Partners:
GCA_000813485_01892
Unannotated protein.
 
 0.999
macB
Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.996
GCA_000813485_03653
Unannotated protein.
 
 0.862
C3737_09895
Unannotated protein.
 
 0.825
C3737_02880
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.808
GCA_000813485_01197
Unannotated protein.
 
 0.807
C3737_19915
Unannotated protein.
  
 0.800
C3737_21340
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.780
GCA_000813485_00430
Unannotated protein.
 
 0.778
C3737_10585
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.763
Your Current Organism:
Aeromonas jandaei
NCBI taxonomy Id: 650
Other names: A. jandaei, ATCC 49568, CCUG 29543, CCUG 30353, CDC 0787-80, CECT 4228, CIP 104171, DSM 7311, JCM 8316, LMG 12221, LMG:12221, genospecies DNA group 9 A. sobria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.