STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813485_02160Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_000813485_02161
Unannotated protein.
 
     0.690
C3737_02990
Unannotated protein.
   
    0.616
C3737_11010
Unannotated protein; Belongs to the TPP enzyme family.
  
    0.613
C3737_07240
Unannotated protein.
   
    0.601
GCA_000813485_02162
Unannotated protein.
 
     0.593
C3737_04645
Unannotated protein; Belongs to the flavin oxidoreductase frp family.
  
 
  0.565
C3737_09100
Unannotated protein; Belongs to the flagella basal body rod proteins family.
    
   0.549
C3737_12470
Unannotated protein.
    
  0.536
C3737_00140
Unannotated protein.
   
    0.489
C3737_12175
Unannotated protein.
   
 
  0.487
Your Current Organism:
Aeromonas jandaei
NCBI taxonomy Id: 650
Other names: A. jandaei, ATCC 49568, CCUG 29543, CCUG 30353, CDC 0787-80, CECT 4228, CIP 104171, DSM 7311, JCM 8316, LMG 12221, LMG:12221, genospecies DNA group 9 A. sobria
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.