STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813485_02234Unannotated protein. (409 aa)    
Predicted Functional Partners:
GCA_000813485_00290
Unannotated protein.
  
     0.745
GCA_000813485_00288
Unannotated protein.
  
     0.741
GCA_000813485_03215
Unannotated protein.
  
     0.706
C3737_01400
Unannotated protein.
  
     0.606
C3737_00800
Unannotated protein.
 
     0.488
C3737_04600
Unannotated protein.
  
     0.482
GCA_000813485_03499
Unannotated protein.
  
     0.479
C3737_17010
Unannotated protein.
  
     0.472
GCA_000813485_04260
Unannotated protein.
  
     0.455
GCA_000813485_00457
Unannotated protein.
  
     0.453
Your Current Organism:
Aeromonas jandaei
NCBI taxonomy Id: 650
Other names: A. jandaei, ATCC 49568, CCUG 29543, CCUG 30353, CDC 0787-80, CECT 4228, CIP 104171, DSM 7311, JCM 8316, LMG 12221, LMG:12221, genospecies DNA group 9 A. sobria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.