Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3737_07350 | C3737_10330 | GCA_000813485_03182 | GCA_000813485_02616 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.635 |
C3737_07350 | C3737_12940 | GCA_000813485_03182 | GCA_000813485_03052 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.745 |
C3737_07350 | C3737_17250 | GCA_000813485_03182 | GCA_000813485_02989 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.408 |
C3737_07350 | nifJ-2 | GCA_000813485_03182 | GCA_000813485_02779 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.846 |
C3737_10285 | C3737_10330 | GCA_000813485_03661 | GCA_000813485_02616 | Unannotated protein. | Unannotated protein. | 0.610 |
C3737_10285 | C3737_19285 | GCA_000813485_03661 | GCA_000813485_02247 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.603 |
C3737_10285 | GCA_000813485_00425 | GCA_000813485_03661 | GCA_000813485_00425 | Unannotated protein. | Unannotated protein. | 0.450 |
C3737_10285 | GCA_000813485_04133 | GCA_000813485_03661 | GCA_000813485_04133 | Unannotated protein. | Unannotated protein. | 0.423 |
C3737_10285 | gabT | GCA_000813485_03661 | GCA_000813485_03663 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.674 |
C3737_10285 | nifJ-2 | GCA_000813485_03661 | GCA_000813485_02779 | Unannotated protein. | Unannotated protein. | 0.599 |
C3737_10330 | C3737_07350 | GCA_000813485_02616 | GCA_000813485_03182 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.635 |
C3737_10330 | C3737_10285 | GCA_000813485_02616 | GCA_000813485_03661 | Unannotated protein. | Unannotated protein. | 0.610 |
C3737_10330 | C3737_12940 | GCA_000813485_02616 | GCA_000813485_03052 | Unannotated protein. | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.708 |
C3737_10330 | C3737_17250 | GCA_000813485_02616 | GCA_000813485_02989 | Unannotated protein. | Unannotated protein. | 0.610 |
C3737_10330 | C3737_19285 | GCA_000813485_02616 | GCA_000813485_02247 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.721 |
C3737_10330 | GCA_000813485_00425 | GCA_000813485_02616 | GCA_000813485_00425 | Unannotated protein. | Unannotated protein. | 0.613 |
C3737_10330 | GCA_000813485_04133 | GCA_000813485_02616 | GCA_000813485_04133 | Unannotated protein. | Unannotated protein. | 0.817 |
C3737_10330 | gabT | GCA_000813485_02616 | GCA_000813485_03663 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.635 |
C3737_10330 | hisI | GCA_000813485_02616 | GCA_000813485_02408 | Unannotated protein. | Unannotated protein; In the N-terminal section; belongs to the PRA-CH family. | 0.709 |
C3737_10330 | nifJ-2 | GCA_000813485_02616 | GCA_000813485_02779 | Unannotated protein. | Unannotated protein. | 0.785 |
page 1 of 3