Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3737_00710 | GCA_000813485_03202 | GCA_000813485_02790 | GCA_000813485_03202 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.540 |
C3737_00710 | guaA | GCA_000813485_02790 | GCA_000813485_01120 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.584 |
C3737_00710 | guaB | GCA_000813485_02790 | GCA_000813485_01119 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.621 |
C3737_08845 | GCA_000813485_03202 | GCA_000813485_00311 | GCA_000813485_03202 | Unannotated protein. | Unannotated protein. | 0.485 |
C3737_17265 | C3737_18095 | GCA_000813485_02986 | GCA_000813485_00495 | Unannotated protein. | Unannotated protein. | 0.722 |
C3737_17265 | GCA_000813485_03202 | GCA_000813485_02986 | GCA_000813485_03202 | Unannotated protein. | Unannotated protein. | 0.669 |
C3737_17265 | apt | GCA_000813485_02986 | GCA_000813485_02430 | Unannotated protein. | Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.650 |
C3737_17265 | gpt | GCA_000813485_02986 | GCA_000813485_03106 | Unannotated protein. | Unannotated protein; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. | 0.650 |
C3737_17265 | guaA | GCA_000813485_02986 | GCA_000813485_01120 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.616 |
C3737_17265 | guaB | GCA_000813485_02986 | GCA_000813485_01119 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.959 |
C3737_17265 | purH | GCA_000813485_02986 | GCA_000813485_01973 | Unannotated protein. | Unannotated protein. | 0.513 |
C3737_18095 | C3737_17265 | GCA_000813485_00495 | GCA_000813485_02986 | Unannotated protein. | Unannotated protein. | 0.722 |
C3737_18095 | C3737_19285 | GCA_000813485_00495 | GCA_000813485_02247 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.742 |
C3737_18095 | GCA_000813485_03202 | GCA_000813485_00495 | GCA_000813485_03202 | Unannotated protein. | Unannotated protein. | 0.474 |
C3737_18095 | guaA | GCA_000813485_00495 | GCA_000813485_01120 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.930 |
C3737_18095 | guaB | GCA_000813485_00495 | GCA_000813485_01119 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.410 |
C3737_18095 | purH | GCA_000813485_00495 | GCA_000813485_01973 | Unannotated protein. | Unannotated protein. | 0.737 |
C3737_19285 | C3737_18095 | GCA_000813485_02247 | GCA_000813485_00495 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.742 |
C3737_19285 | GCA_000813485_03202 | GCA_000813485_02247 | GCA_000813485_03202 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.527 |
C3737_19285 | guaA | GCA_000813485_02247 | GCA_000813485_01120 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.556 |
page 1 of 4