Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3737_03605 | C3737_03950 | GCA_000813485_00306 | GCA_000813485_03501 | Unannotated protein. | Unannotated protein. | 0.942 |
C3737_03605 | C3737_15070 | GCA_000813485_00306 | GCA_000813485_01365 | Unannotated protein. | Unannotated protein. | 0.932 |
C3737_03605 | dadA | GCA_000813485_00306 | GCA_000813485_03203 | Unannotated protein. | Unannotated protein; Oxidative deamination of D-amino acids. | 0.928 |
C3737_03605 | hisC | GCA_000813485_00306 | GCA_000813485_02416 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.943 |
C3737_03605 | hppD | GCA_000813485_00306 | GCA_000813485_03433 | Unannotated protein. | Unannotated protein. | 0.972 |
C3737_03950 | C3737_03605 | GCA_000813485_03501 | GCA_000813485_00306 | Unannotated protein. | Unannotated protein. | 0.942 |
C3737_03950 | C3737_15070 | GCA_000813485_03501 | GCA_000813485_01365 | Unannotated protein. | Unannotated protein. | 0.889 |
C3737_03950 | C3737_17570 | GCA_000813485_03501 | GCA_000813485_03680 | Unannotated protein. | Unannotated protein. | 0.957 |
C3737_03950 | dadA | GCA_000813485_03501 | GCA_000813485_03203 | Unannotated protein. | Unannotated protein; Oxidative deamination of D-amino acids. | 0.864 |
C3737_03950 | gcvT | GCA_000813485_03501 | GCA_000813485_03292 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.962 |
C3737_15070 | C3737_03605 | GCA_000813485_01365 | GCA_000813485_00306 | Unannotated protein. | Unannotated protein. | 0.932 |
C3737_15070 | C3737_03950 | GCA_000813485_01365 | GCA_000813485_03501 | Unannotated protein. | Unannotated protein. | 0.889 |
C3737_15070 | dadA | GCA_000813485_01365 | GCA_000813485_03203 | Unannotated protein. | Unannotated protein; Oxidative deamination of D-amino acids. | 0.928 |
C3737_15070 | hisC | GCA_000813485_01365 | GCA_000813485_02416 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.942 |
C3737_15070 | hppD | GCA_000813485_01365 | GCA_000813485_03433 | Unannotated protein. | Unannotated protein. | 0.966 |
C3737_17570 | C3737_03950 | GCA_000813485_03680 | GCA_000813485_03501 | Unannotated protein. | Unannotated protein. | 0.957 |
C3737_17570 | dadA | GCA_000813485_03680 | GCA_000813485_03203 | Unannotated protein. | Unannotated protein; Oxidative deamination of D-amino acids. | 0.928 |
C3737_17570 | gcvT | GCA_000813485_03680 | GCA_000813485_03292 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.605 |
C3737_17570 | hisC | GCA_000813485_03680 | GCA_000813485_02416 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.408 |
GCA_000813485_03511 | alr | GCA_000813485_03511 | GCA_000813485_01768 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.934 |
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