STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813485_03369Unannotated protein. (233 aa)    
Predicted Functional Partners:
C3737_04650
Unannotated protein.
 
     0.824
C3737_09390
Unannotated protein.
  
     0.774
C3737_05135
Unannotated protein.
  
     0.773
C3737_15290
Unannotated protein.
  
     0.771
C3737_15540
Unannotated protein.
  
     0.769
C3737_12930
Unannotated protein.
  
     0.764
C3737_18380
Unannotated protein.
  
     0.763
C3737_17425
Unannotated protein.
  
     0.757
rraB
Unannotated protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.
  
     0.749
C3737_08145
Unannotated protein.
  
     0.747
Your Current Organism:
Aeromonas jandaei
NCBI taxonomy Id: 650
Other names: A. jandaei, ATCC 49568, CCUG 29543, CCUG 30353, CDC 0787-80, CECT 4228, CIP 104171, DSM 7311, JCM 8316, LMG 12221, LMG:12221, genospecies DNA group 9 A. sobria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.