Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3737_02695 | C3737_21255 | GCA_000813485_02229 | GCA_000813485_00670 | Unannotated protein. | Unannotated protein. | 0.931 |
C3737_02695 | GCA_000813485_02985 | GCA_000813485_02229 | GCA_000813485_02985 | Unannotated protein. | Unannotated protein. | 0.941 |
C3737_02695 | GCA_000813485_03511 | GCA_000813485_02229 | GCA_000813485_03511 | Unannotated protein. | Unannotated protein. | 0.822 |
C3737_02695 | alr | GCA_000813485_02229 | GCA_000813485_01768 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.939 |
C3737_02695 | alr-2 | GCA_000813485_02229 | GCA_000813485_03776 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.939 |
C3737_02695 | dadA | GCA_000813485_02229 | GCA_000813485_03203 | Unannotated protein. | Unannotated protein; Oxidative deamination of D-amino acids. | 0.492 |
C3737_02695 | ddl | GCA_000813485_02229 | GCA_000813485_04129 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.596 |
C3737_02695 | murE | GCA_000813485_02229 | GCA_000813485_00898 | Unannotated protein. | Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.465 |
C3737_02695 | murF | GCA_000813485_02229 | GCA_000813485_00899 | Unannotated protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.569 |
C3737_21255 | C3737_02695 | GCA_000813485_00670 | GCA_000813485_02229 | Unannotated protein. | Unannotated protein. | 0.931 |
C3737_21255 | GCA_000813485_03511 | GCA_000813485_00670 | GCA_000813485_03511 | Unannotated protein. | Unannotated protein. | 0.810 |
C3737_21255 | alr | GCA_000813485_00670 | GCA_000813485_01768 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.830 |
C3737_21255 | alr-2 | GCA_000813485_00670 | GCA_000813485_03776 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.830 |
GCA_000813485_02985 | C3737_02695 | GCA_000813485_02985 | GCA_000813485_02229 | Unannotated protein. | Unannotated protein. | 0.941 |
GCA_000813485_02985 | GCA_000813485_03511 | GCA_000813485_02985 | GCA_000813485_03511 | Unannotated protein. | Unannotated protein. | 0.946 |
GCA_000813485_02985 | alr | GCA_000813485_02985 | GCA_000813485_01768 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.981 |
GCA_000813485_02985 | alr-2 | GCA_000813485_02985 | GCA_000813485_03776 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.981 |
GCA_000813485_02985 | murF | GCA_000813485_02985 | GCA_000813485_00899 | Unannotated protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.475 |
GCA_000813485_03511 | C3737_02695 | GCA_000813485_03511 | GCA_000813485_02229 | Unannotated protein. | Unannotated protein. | 0.822 |
GCA_000813485_03511 | C3737_21255 | GCA_000813485_03511 | GCA_000813485_00670 | Unannotated protein. | Unannotated protein. | 0.810 |
page 1 of 4