STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000813485_03993Unannotated protein. (183 aa)    
Predicted Functional Partners:
GCA_000813485_03991
Unannotated protein.
 
 
   0.935
GCA_000813485_03992
Unannotated protein.
 
  
 0.865
GCA_000813485_02180
Unannotated protein.
 
 
   0.742
C3737_21765
Unannotated protein.
   
   0.635
GCA_000813485_01483
Unannotated protein.
   
   0.635
GCA_000813485_01696
Unannotated protein.
   
   0.635
C3737_10625
Unannotated protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
   0.635
C3737_10620
Unannotated protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
   0.635
C3737_03360
Unannotated protein.
   
   0.635
pal
Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
   0.635
Your Current Organism:
Aeromonas jandaei
NCBI taxonomy Id: 650
Other names: A. jandaei, ATCC 49568, CCUG 29543, CCUG 30353, CDC 0787-80, CECT 4228, CIP 104171, DSM 7311, JCM 8316, LMG 12221, LMG:12221, genospecies DNA group 9 A. sobria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.