STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5VGV2_PHACSbVLRF1 domain-containing protein. (597 aa)    
Predicted Functional Partners:
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.792
K5VAH9_PHACS
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.670
K5VW34_PHACS
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.670
K5WJX5_PHACS
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 
 0.670
K5UZR2_PHACS
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 
 0.637
K5VN21_PHACS
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.637
K5VZ22_PHACS
U-box domain-containing protein.
    
 
 0.621
K5V862_PHACS
Uncharacterized protein.
   
 
 0.606
K5W832_PHACS
Uncharacterized protein.
    
 
 0.582
K5W9Z5_PHACS
MPN domain-containing protein.
    
 
 0.570
Your Current Organism:
Phanerochaete carnosa
NCBI taxonomy Id: 650164
Other names: P. carnosa HHB-10118-sp, Phanerochaete carnosa HHB-10118-sp
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