STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5WMH2_PHACSEpimerase domain-containing protein. (299 aa)    
Predicted Functional Partners:
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.706
K5WJS6_PHACS
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.703
K5VT78_PHACS
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.700
K5WAT4_PHACS
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
  0.695
K5W5Y1_PHACS
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.693
K5WEZ7_PHACS
Ribosomal_S10 domain-containing protein.
   
  0.686
K5WMP1_PHACS
Uncharacterized protein.
   
 0.686
K5VB50_PHACS
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
  0.670
K5W6V5_PHACS
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.669
K5X4G8_PHACS
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
  0.659
Your Current Organism:
Phanerochaete carnosa
NCBI taxonomy Id: 650164
Other names: P. carnosa HHB-10118-sp, Phanerochaete carnosa HHB-10118-sp
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