Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIU30107.1 | tehA | Cul210931_0751 | Cul210931_0752 | Multicopper oxidase. | C4-dicarboxylate transporter/malic acid transport protein. | 0.532 |
AIU30107.1 | tetR1 | Cul210931_0751 | Cul210931_0754 | Multicopper oxidase. | TetR family transcriptional regulator. | 0.526 |
gltT | tehA | Cul210931_2031 | Cul210931_0752 | Sodium:glutamate symporter. | C4-dicarboxylate transporter/malic acid transport protein. | 0.736 |
speE | tehA | Cul210931_0914 | Cul210931_0752 | Spermidine synthase. | C4-dicarboxylate transporter/malic acid transport protein. | 0.439 |
tehA | AIU30107.1 | Cul210931_0752 | Cul210931_0751 | C4-dicarboxylate transporter/malic acid transport protein. | Multicopper oxidase. | 0.532 |
tehA | gltT | Cul210931_0752 | Cul210931_2031 | C4-dicarboxylate transporter/malic acid transport protein. | Sodium:glutamate symporter. | 0.736 |
tehA | speE | Cul210931_0752 | Cul210931_0914 | C4-dicarboxylate transporter/malic acid transport protein. | Spermidine synthase. | 0.439 |
tehA | tetR1 | Cul210931_0752 | Cul210931_0754 | C4-dicarboxylate transporter/malic acid transport protein. | TetR family transcriptional regulator. | 0.409 |
tetR1 | AIU30107.1 | Cul210931_0754 | Cul210931_0751 | TetR family transcriptional regulator. | Multicopper oxidase. | 0.526 |
tetR1 | tehA | Cul210931_0754 | Cul210931_0752 | TetR family transcriptional regulator. | C4-dicarboxylate transporter/malic acid transport protein. | 0.409 |