STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK26991.1Protein of unknown function. (140 aa)    
Predicted Functional Partners:
SEL27823.1
rubredoxin-NAD+ reductase; Belongs to the FAD-dependent oxidoreductase family.
  
 0.973
SEM05147.1
Nitrite reductase (NADH) large subunit.
  
 0.973
SEM05187.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.973
SEK27074.1
Glutaredoxin 1.
     
 0.702
SEK79199.1
Phosphate acetyltransferase.
     
 0.679
SEM08945.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
     
 0.676
SEL88493.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
     
 0.639
SEL33882.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.633
SEK27032.1
Myo-inositol-1(or 4)-monophosphatase.
       0.623
SEK26946.1
3-hydroxybutyrate dehydrogenase.
       0.499
Your Current Organism:
Halomonas daqiaonensis
NCBI taxonomy Id: 650850
Other names: CGMCC 1.9150, H. daqiaonensis, Halomonas daqiaonensis Qu et al. 2011, Halomonas sp. YCSA28, Halomonas sp. YCSA39, MCCC 1B00920, NCCB 100305, strain YCSA28
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