Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK21569.1 | SEK22916.1 | SAMN04488129_10148 | SAMN04488129_10176 | propionyl-CoA synthetase. | Acetyltransferase. | 0.844 |
SEK21569.1 | SEK79199.1 | SAMN04488129_10148 | SAMN04488129_104166 | propionyl-CoA synthetase. | Phosphate acetyltransferase. | 0.954 |
SEK21569.1 | SEK88767.1 | SAMN04488129_10148 | SAMN04488129_10564 | propionyl-CoA synthetase. | acetyl-CoA synthetase. | 0.939 |
SEK21569.1 | SEL33114.1 | SAMN04488129_10148 | SAMN04488129_1095 | propionyl-CoA synthetase. | Oxaloacetate decarboxylase, alpha subunit. | 0.695 |
SEK21569.1 | SEL99417.1 | SAMN04488129_10148 | SAMN04488129_12157 | propionyl-CoA synthetase. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.984 |
SEK21569.1 | SEM03829.1 | SAMN04488129_10148 | SAMN04488129_1232 | propionyl-CoA synthetase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.954 |
SEK21569.1 | SEM08945.1 | SAMN04488129_10148 | SAMN04488129_12530 | propionyl-CoA synthetase. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.805 |
SEK21569.1 | ackA | SAMN04488129_10148 | SAMN04488129_104165 | propionyl-CoA synthetase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.940 |
SEK21569.1 | acsA | SAMN04488129_10148 | SAMN04488129_10796 | propionyl-CoA synthetase. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.929 |
SEK22866.1 | SEK22916.1 | SAMN04488129_10175 | SAMN04488129_10176 | Acetoin utilization deacetylase AcuC. | Acetyltransferase. | 0.883 |
SEK22916.1 | SEK21569.1 | SAMN04488129_10176 | SAMN04488129_10148 | Acetyltransferase. | propionyl-CoA synthetase. | 0.844 |
SEK22916.1 | SEK22866.1 | SAMN04488129_10176 | SAMN04488129_10175 | Acetyltransferase. | Acetoin utilization deacetylase AcuC. | 0.883 |
SEK22916.1 | SEK79199.1 | SAMN04488129_10176 | SAMN04488129_104166 | Acetyltransferase. | Phosphate acetyltransferase. | 0.945 |
SEK22916.1 | SEK88767.1 | SAMN04488129_10176 | SAMN04488129_10564 | Acetyltransferase. | acetyl-CoA synthetase. | 0.834 |
SEK22916.1 | SEL33114.1 | SAMN04488129_10176 | SAMN04488129_1095 | Acetyltransferase. | Oxaloacetate decarboxylase, alpha subunit. | 0.740 |
SEK22916.1 | SEL99417.1 | SAMN04488129_10176 | SAMN04488129_12157 | Acetyltransferase. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.898 |
SEK22916.1 | SEM03829.1 | SAMN04488129_10176 | SAMN04488129_1232 | Acetyltransferase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.971 |
SEK22916.1 | SEM08945.1 | SAMN04488129_10176 | SAMN04488129_12530 | Acetyltransferase. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.874 |
SEK22916.1 | ackA | SAMN04488129_10176 | SAMN04488129_104165 | Acetyltransferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.827 |
SEK22916.1 | acsA | SAMN04488129_10176 | SAMN04488129_10796 | Acetyltransferase. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.828 |
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