STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL33882.1Glutamate synthase (NADPH/NADH) large chain. (1482 aa)    
Predicted Functional Partners:
SEK25815.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.999
SEL16786.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 0.999
SEL13071.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
0.999
SEL33841.1
Glutamate synthase (NADPH/NADH) small chain.
 0.999
SEK58595.1
L-glutamine synthetase.
  
 
 0.989
SEK58795.1
Glutamine synthetase.
  
 
 0.989
SEK79782.1
L-glutamine synthetase.
  
 
 0.989
SEM05040.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.985
SEL69372.1
Twin arginine-targeting protein translocase TatB.
  
 0.984
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
 
 0.982
Your Current Organism:
Halomonas daqiaonensis
NCBI taxonomy Id: 650850
Other names: CGMCC 1.9150, H. daqiaonensis, Halomonas daqiaonensis Qu et al. 2011, Halomonas sp. YCSA28, Halomonas sp. YCSA39, MCCC 1B00920, NCCB 100305, strain YCSA28
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