STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL92037.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
SEL92085.1
Aminopeptidase N.
       0.762
SEL91998.1
Hypothetical protein; Belongs to the UPF0234 family.
       0.739
SEL16253.1
Hypothetical protein.
   
    0.682
SEL91961.1
Ribosomal protein S18 acetylase RimI.
       0.535
SEK30238.1
ATP-binding cassette, subfamily C, CydC.
    
  0.437
Your Current Organism:
Halomonas daqiaonensis
NCBI taxonomy Id: 650850
Other names: CGMCC 1.9150, H. daqiaonensis, Halomonas daqiaonensis Qu et al. 2011, Halomonas sp. YCSA28, Halomonas sp. YCSA39, MCCC 1B00920, NCCB 100305, strain YCSA28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.