STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL96016.1Alcohol dehydrogenase, class IV. (359 aa)    
Predicted Functional Partners:
SEL96115.1
Hydroxyquinol 1,2-dioxygenase.
  
 0.999
SEL97439.1
Alcohol dehydrogenase, propanol-preferring.
  
 0.981
SEL20128.1
Alcohol dehydrogenase GroES-like domain-containing protein.
    
 0.956
SEL76126.1
Zinc-binding dehydrogenase.
    
 0.956
SEM24141.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
    
 0.956
SEL96049.1
Cytosine/adenosine deaminase.
 
 
   0.903
SEL96082.1
3-hydroxyisobutyrate dehydrogenase.
 
  
  0.854
SEK79341.1
Dienelactone hydrolase.
  
 
 0.836
SEK79199.1
Phosphate acetyltransferase.
  
 
 0.835
SEL33882.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.813
Your Current Organism:
Halomonas daqiaonensis
NCBI taxonomy Id: 650850
Other names: CGMCC 1.9150, H. daqiaonensis, Halomonas daqiaonensis Qu et al. 2011, Halomonas sp. YCSA28, Halomonas sp. YCSA39, MCCC 1B00920, NCCB 100305, strain YCSA28
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