Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL33882.1 | SEL68614.1 | SAMN04488129_10924 | SAMN04488129_11416 | Glutamate synthase (NADPH/NADH) large chain. | LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.546 |
SEL33882.1 | SEM09086.1 | SAMN04488129_10924 | SAMN04488129_12534 | Glutamate synthase (NADPH/NADH) large chain. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.475 |
SEL68614.1 | SEL33882.1 | SAMN04488129_11416 | SAMN04488129_10924 | LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. | Glutamate synthase (NADPH/NADH) large chain. | 0.546 |
SEL68614.1 | SEM09086.1 | SAMN04488129_11416 | SAMN04488129_12534 | LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.524 |
SEM09086.1 | SEL33882.1 | SAMN04488129_12534 | SAMN04488129_10924 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Glutamate synthase (NADPH/NADH) large chain. | 0.475 |
SEM09086.1 | SEL68614.1 | SAMN04488129_12534 | SAMN04488129_11416 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.524 |
SEM09086.1 | SEM09120.1 | SAMN04488129_12534 | SAMN04488129_12535 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.692 |
SEM09086.1 | SEM09147.1 | SAMN04488129_12534 | SAMN04488129_12536 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.616 |
SEM09120.1 | SEM09086.1 | SAMN04488129_12535 | SAMN04488129_12534 | Hypothetical protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.692 |
SEM09120.1 | SEM09147.1 | SAMN04488129_12535 | SAMN04488129_12536 | Hypothetical protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.906 |
SEM09147.1 | SEM09086.1 | SAMN04488129_12536 | SAMN04488129_12534 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.616 |
SEM09147.1 | SEM09120.1 | SAMN04488129_12536 | SAMN04488129_12535 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Hypothetical protein. | 0.906 |