Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK21394.1 | SEK25918.1 | SAMN04488129_10144 | SAMN04488129_101137 | NAD+ diphosphatase. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.931 |
SEK21394.1 | cobB | SAMN04488129_10144 | SAMN04488129_112108 | NAD+ diphosphatase. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.927 |
SEK21394.1 | nadD | SAMN04488129_10144 | SAMN04488129_1059 | NAD+ diphosphatase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.925 |
SEK21394.1 | nadE | SAMN04488129_10144 | SAMN04488129_13311 | NAD+ diphosphatase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.927 |
SEK25918.1 | SEK21394.1 | SAMN04488129_101137 | SAMN04488129_10144 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | NAD+ diphosphatase. | 0.931 |
SEK25918.1 | cobB | SAMN04488129_101137 | SAMN04488129_112108 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.970 |
SEK25918.1 | nadD | SAMN04488129_101137 | SAMN04488129_1059 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.953 |
SEK25918.1 | nadE | SAMN04488129_101137 | SAMN04488129_13311 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.980 |
SEK25918.1 | nadK | SAMN04488129_101137 | SAMN04488129_1218 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.938 |
SEK32698.1 | SEL33882.1 | SAMN04488129_101269 | SAMN04488129_10924 | Chorismate mutase. | Glutamate synthase (NADPH/NADH) large chain. | 0.546 |
SEK32698.1 | SEL88848.1 | SAMN04488129_101269 | SAMN04488129_11872 | Chorismate mutase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.493 |
SEK32698.1 | nadE | SAMN04488129_101269 | SAMN04488129_13311 | Chorismate mutase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.821 |
SEL33882.1 | SEK32698.1 | SAMN04488129_10924 | SAMN04488129_101269 | Glutamate synthase (NADPH/NADH) large chain. | Chorismate mutase. | 0.546 |
SEL33882.1 | SEL88848.1 | SAMN04488129_10924 | SAMN04488129_11872 | Glutamate synthase (NADPH/NADH) large chain. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.976 |
SEL33882.1 | SEL92611.1 | SAMN04488129_10924 | SAMN04488129_11971 | Glutamate synthase (NADPH/NADH) large chain. | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.410 |
SEL33882.1 | nadE | SAMN04488129_10924 | SAMN04488129_13311 | Glutamate synthase (NADPH/NADH) large chain. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.871 |
SEL88848.1 | SEK32698.1 | SAMN04488129_11872 | SAMN04488129_101269 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Chorismate mutase. | 0.493 |
SEL88848.1 | SEL33882.1 | SAMN04488129_11872 | SAMN04488129_10924 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glutamate synthase (NADPH/NADH) large chain. | 0.976 |
SEL88848.1 | nadE | SAMN04488129_11872 | SAMN04488129_13311 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.812 |
SEL92611.1 | SEL33882.1 | SAMN04488129_11971 | SAMN04488129_10924 | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | Glutamate synthase (NADPH/NADH) large chain. | 0.410 |
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