STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM24141.1S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. (46 aa)    
Predicted Functional Partners:
SEM07355.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.983
SEL96016.1
Alcohol dehydrogenase, class IV.
    
 0.956
SEL76126.1
Zinc-binding dehydrogenase.
  
     0.774
SEL97439.1
Alcohol dehydrogenase, propanol-preferring.
    
 0.747
SEM24108.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.686
SEK26687.1
2,5-diketo-D-gluconate reductase B.
   
 0.638
SEL88451.1
Glutathione-independent formaldehyde dehydrogenase.
   
 
  0.615
SEL04930.1
Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.601
SEK88527.1
tRNA(Arg) A34 adenosine deaminase TadA.
  
 
  0.455
tadA
tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.455
Your Current Organism:
Halomonas daqiaonensis
NCBI taxonomy Id: 650850
Other names: CGMCC 1.9150, H. daqiaonensis, Halomonas daqiaonensis Qu et al. 2011, Halomonas sp. YCSA28, Halomonas sp. YCSA39, MCCC 1B00920, NCCB 100305, strain YCSA28
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