STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR41465.140-residue YVTN family beta-propeller repeat-containing protein. (1041 aa)    
Predicted Functional Partners:
SFR65801.1
Plastocyanin.
   
   0.914
SFR65820.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.872
SFR85967.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.867
SFR44297.1
Cytochrome c, mono-and diheme variants.
  
 0.863
SFR44776.1
Hypothetical protein.
  
 0.863
SFR48673.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.863
SFR59582.1
Cytochrome c-550 PedF.
  
 0.863
SFR77878.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
 0.863
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.856
SFR56118.1
Nitric oxide reductase, NorZ apoprotein.
  
 0.839
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.