Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR41787.1 | SFR41798.1 | SAMN05216203_0118 | SAMN05216203_0119 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | DTW domain-containing protein YfiP; Manually curated. | 0.494 |
SFR41798.1 | SFR41787.1 | SAMN05216203_0119 | SAMN05216203_0118 | DTW domain-containing protein YfiP; Manually curated. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.494 |
SFR41798.1 | SFR41813.1 | SAMN05216203_0119 | SAMN05216203_0121 | DTW domain-containing protein YfiP; Manually curated. | Hypothetical protein. | 0.443 |
SFR41798.1 | SFR55458.1 | SAMN05216203_0119 | SAMN05216203_1342 | DTW domain-containing protein YfiP; Manually curated. | Lactoylglutathione lyase. | 0.484 |
SFR41798.1 | SFR65446.1 | SAMN05216203_0119 | SAMN05216203_2219 | DTW domain-containing protein YfiP; Manually curated. | MAPEG family protein. | 0.419 |
SFR41813.1 | SFR41798.1 | SAMN05216203_0121 | SAMN05216203_0119 | Hypothetical protein. | DTW domain-containing protein YfiP; Manually curated. | 0.443 |
SFR55458.1 | SFR41798.1 | SAMN05216203_1342 | SAMN05216203_0119 | Lactoylglutathione lyase. | DTW domain-containing protein YfiP; Manually curated. | 0.484 |
SFR55458.1 | SFR65446.1 | SAMN05216203_1342 | SAMN05216203_2219 | Lactoylglutathione lyase. | MAPEG family protein. | 0.541 |
SFR65446.1 | SFR41798.1 | SAMN05216203_2219 | SAMN05216203_0119 | MAPEG family protein. | DTW domain-containing protein YfiP; Manually curated. | 0.419 |
SFR65446.1 | SFR55458.1 | SAMN05216203_2219 | SAMN05216203_1342 | MAPEG family protein. | Lactoylglutathione lyase. | 0.541 |