Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFR42353.1 | SFR42363.1 | SAMN05216203_0173 | SAMN05216203_0174 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.773 |
| SFR42353.1 | SFR42374.1 | SAMN05216203_0173 | SAMN05216203_0175 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.477 |
| SFR42353.1 | SFR42792.1 | SAMN05216203_0173 | SAMN05216203_0215 | Putative zinc-or iron-chelating domain-containing protein. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.825 |
| SFR42353.1 | SFR75815.1 | SAMN05216203_0173 | SAMN05216203_2821 | Putative zinc-or iron-chelating domain-containing protein. | RIO kinase 1. | 0.581 |
| SFR42353.1 | SFR77406.1 | SAMN05216203_0173 | SAMN05216203_2947 | Putative zinc-or iron-chelating domain-containing protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.451 |
| SFR42353.1 | SFR77420.1 | SAMN05216203_0173 | SAMN05216203_2948 | Putative zinc-or iron-chelating domain-containing protein. | Flagellar protein FliS. | 0.402 |
| SFR42353.1 | fliA | SAMN05216203_0173 | SAMN05216203_0926 | Putative zinc-or iron-chelating domain-containing protein. | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.400 |
| SFR42353.1 | ribB | SAMN05216203_0173 | SAMN05216203_3536 | Putative zinc-or iron-chelating domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.507 |
| SFR42363.1 | SFR42353.1 | SAMN05216203_0174 | SAMN05216203_0173 | Hypothetical protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.773 |
| SFR42363.1 | SFR42374.1 | SAMN05216203_0174 | SAMN05216203_0175 | Hypothetical protein. | Hypothetical protein. | 0.477 |
| SFR42374.1 | SFR42353.1 | SAMN05216203_0175 | SAMN05216203_0173 | Hypothetical protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.477 |
| SFR42374.1 | SFR42363.1 | SAMN05216203_0175 | SAMN05216203_0174 | Hypothetical protein. | Hypothetical protein. | 0.477 |
| SFR42792.1 | SFR42353.1 | SAMN05216203_0215 | SAMN05216203_0173 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.825 |
| SFR42792.1 | SFR77406.1 | SAMN05216203_0215 | SAMN05216203_2947 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.974 |
| SFR42792.1 | SFR77420.1 | SAMN05216203_0215 | SAMN05216203_2948 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar protein FliS. | 0.980 |
| SFR42792.1 | fliA | SAMN05216203_0215 | SAMN05216203_0926 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.972 |
| SFR75815.1 | SFR42353.1 | SAMN05216203_2821 | SAMN05216203_0173 | RIO kinase 1. | Putative zinc-or iron-chelating domain-containing protein. | 0.581 |
| SFR77406.1 | SFR42353.1 | SAMN05216203_2947 | SAMN05216203_0173 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Putative zinc-or iron-chelating domain-containing protein. | 0.451 |
| SFR77406.1 | SFR42792.1 | SAMN05216203_2947 | SAMN05216203_0215 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.974 |
| SFR77406.1 | SFR77420.1 | SAMN05216203_2947 | SAMN05216203_2948 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliS. | 0.995 |
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