STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44563.1Hypothetical protein. (437 aa)    
Predicted Functional Partners:
SFR77904.1
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
 
  
  0.589
SFR44573.1
Hypothetical protein.
       0.543
SFR41496.1
Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03.
    
  0.490
SFR81672.1
Glutamate decarboxylase.
    
  0.458
SFR63429.1
Cystathione beta-lyase.
    
  0.455
SFR77096.1
Inactive transglutaminase fused to 7 transmembrane helices.
  
  
 0.454
SFR75148.1
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
  0.453
SFR76730.1
Aminopeptidase N.
    
  0.453
SFR41000.1
Chalcone isomerase-like.
    
  0.427
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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