STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44687.1Uncharacterized domain 1-containing protein. (150 aa)    
Predicted Functional Partners:
SFR44675.1
MatE protein.
 
     0.706
SFR63713.1
Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.625
SFR44697.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
       0.599
SFR72984.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.541
SFR44710.1
Transcriptional regulator, HxlR family.
 
     0.527
SFR73014.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 
 0.482
SFR53645.1
Acyl-CoA hydrolase.
     
 0.474
SFR81245.1
acyl-CoA thioesterase YciA.
     
 0.474
SFR72992.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
  
 
 0.472
SFR73003.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
  
 
 0.470
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.