STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR55259.1Signal transduction histidine kinase. (455 aa)    
Predicted Functional Partners:
SFR76647.1
PAS domain-containing protein.
 0.998
SFR82148.1
PAS fold-containing protein.
0.993
SFR67108.1
PAS domain S-box-containing protein.
0.992
SFR64967.1
PAS domain S-box-containing protein.
 
0.991
SFR67229.1
Hypothetical protein.
 
0.990
SFR75137.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.989
SFR84894.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.988
SFR55277.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.983
SFR59414.1
PAS domain S-box-containing protein.
 
0.966
SFR40706.1
Na+/proline symporter.
  
0.962
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.