Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR43604.1 | SFR55290.1 | SAMN05216203_0294 | SAMN05216203_1332 | Protein of unknown function. | Hypothetical protein. | 0.524 |
SFR55238.1 | SFR55259.1 | SAMN05216203_1329 | SAMN05216203_1330 | Uncharacterized protein, YigZ family. | Signal transduction histidine kinase. | 0.773 |
SFR55238.1 | SFR55277.1 | SAMN05216203_1329 | SAMN05216203_1331 | Uncharacterized protein, YigZ family. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.741 |
SFR55238.1 | SFR55290.1 | SAMN05216203_1329 | SAMN05216203_1332 | Uncharacterized protein, YigZ family. | Hypothetical protein. | 0.518 |
SFR55259.1 | SFR55238.1 | SAMN05216203_1330 | SAMN05216203_1329 | Signal transduction histidine kinase. | Uncharacterized protein, YigZ family. | 0.773 |
SFR55259.1 | SFR55277.1 | SAMN05216203_1330 | SAMN05216203_1331 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.983 |
SFR55259.1 | SFR55290.1 | SAMN05216203_1330 | SAMN05216203_1332 | Signal transduction histidine kinase. | Hypothetical protein. | 0.523 |
SFR55277.1 | SFR55238.1 | SAMN05216203_1331 | SAMN05216203_1329 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Uncharacterized protein, YigZ family. | 0.741 |
SFR55277.1 | SFR55259.1 | SAMN05216203_1331 | SAMN05216203_1330 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.983 |
SFR55277.1 | SFR55290.1 | SAMN05216203_1331 | SAMN05216203_1332 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.538 |
SFR55290.1 | SFR43604.1 | SAMN05216203_1332 | SAMN05216203_0294 | Hypothetical protein. | Protein of unknown function. | 0.524 |
SFR55290.1 | SFR55238.1 | SAMN05216203_1332 | SAMN05216203_1329 | Hypothetical protein. | Uncharacterized protein, YigZ family. | 0.518 |
SFR55290.1 | SFR55259.1 | SAMN05216203_1332 | SAMN05216203_1330 | Hypothetical protein. | Signal transduction histidine kinase. | 0.523 |
SFR55290.1 | SFR55277.1 | SAMN05216203_1332 | SAMN05216203_1331 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.538 |
SFR55290.1 | SFR56703.1 | SAMN05216203_1332 | SAMN05216203_1424 | Hypothetical protein. | GST-like protein. | 0.409 |
SFR55290.1 | bpt | SAMN05216203_1332 | SAMN05216203_0760 | Hypothetical protein. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.443 |
SFR56703.1 | SFR55290.1 | SAMN05216203_1424 | SAMN05216203_1332 | GST-like protein. | Hypothetical protein. | 0.409 |
bpt | SFR55290.1 | SAMN05216203_0760 | SAMN05216203_1332 | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Hypothetical protein. | 0.443 |