STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR62642.1Uncharacterized conserved protein. (460 aa)    
Predicted Functional Partners:
SFR75865.1
Serine/threonine protein phosphatase PrpC.
    
   0.841
SFR44427.1
Hypothetical protein.
   
 0.832
SFR53418.1
Hypothetical protein.
   
 0.832
SFR62650.1
2-hydroxychromene-2-carboxylate isomerase.
       0.773
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.665
SFR62661.1
Hypothetical protein.
       0.561
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 
 0.539
SFR41197.1
Protein of unknown function.
  
     0.530
SFR63135.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
  
    0.501
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
    
   0.491
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.