STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR63147.1Chemosensory pili system protein ChpB (putative protein-glutamate methylesterase). (350 aa)    
Predicted Functional Partners:
SFR63135.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.999
SFR63112.1
Twitching motility protein PilJ.
 
 0.997
SFR49904.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.996
SFR63122.1
MCP methyltransferase, CheR-type.
 
 
 0.990
SFR49838.1
Purine-binding chemotaxis protein CheW.
 
 
 0.969
SFR43519.1
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 
 0.962
SFR63102.1
Twitching motility protein PilI.
 
 
 0.956
SFR82148.1
PAS fold-containing protein.
  
 0.952
SFR62085.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.943
SFR63156.1
Chemosensory pili system protein ChpC.
 
 
 0.941
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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