Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR41496.1 | SFR65956.1 | SAMN05216203_0090 | SAMN05216203_2291 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Ribosomal protein S6--L-glutamate ligase. | 0.476 |
SFR41496.1 | SFR85967.1 | SAMN05216203_0090 | SAMN05216203_3527 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Glutamate synthase (NADPH/NADH) large chain. | 0.926 |
SFR41496.1 | gshA | SAMN05216203_0090 | SAMN05216203_1751 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.940 |
SFR63401.1 | SFR65956.1 | SAMN05216203_1998 | SAMN05216203_2291 | Predicted deacylase. | Ribosomal protein S6--L-glutamate ligase. | 0.585 |
SFR63401.1 | SFR74490.1 | SAMN05216203_1998 | SAMN05216203_2699 | Predicted deacylase. | Uncharacterized conserved protein. | 0.773 |
SFR63401.1 | SFR77108.1 | SAMN05216203_1998 | SAMN05216203_2925 | Predicted deacylase. | Uncharacterized conserved protein. | 0.702 |
SFR65950.1 | SFR65956.1 | SAMN05216203_2290 | SAMN05216203_2291 | Hypothetical protein. | Ribosomal protein S6--L-glutamate ligase. | 0.538 |
SFR65950.1 | SFR65962.1 | SAMN05216203_2290 | SAMN05216203_2292 | Hypothetical protein. | Protein of unknown function. | 0.497 |
SFR65956.1 | SFR41496.1 | SAMN05216203_2291 | SAMN05216203_0090 | Ribosomal protein S6--L-glutamate ligase. | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | 0.476 |
SFR65956.1 | SFR63401.1 | SAMN05216203_2291 | SAMN05216203_1998 | Ribosomal protein S6--L-glutamate ligase. | Predicted deacylase. | 0.585 |
SFR65956.1 | SFR65950.1 | SAMN05216203_2291 | SAMN05216203_2290 | Ribosomal protein S6--L-glutamate ligase. | Hypothetical protein. | 0.538 |
SFR65956.1 | SFR65962.1 | SAMN05216203_2291 | SAMN05216203_2292 | Ribosomal protein S6--L-glutamate ligase. | Protein of unknown function. | 0.511 |
SFR65956.1 | SFR74490.1 | SAMN05216203_2291 | SAMN05216203_2699 | Ribosomal protein S6--L-glutamate ligase. | Uncharacterized conserved protein. | 0.755 |
SFR65956.1 | SFR74508.1 | SAMN05216203_2291 | SAMN05216203_2701 | Ribosomal protein S6--L-glutamate ligase. | Hypothetical protein. | 0.592 |
SFR65956.1 | SFR77108.1 | SAMN05216203_2291 | SAMN05216203_2925 | Ribosomal protein S6--L-glutamate ligase. | Uncharacterized conserved protein. | 0.685 |
SFR65956.1 | SFR77904.1 | SAMN05216203_2291 | SAMN05216203_2986 | Ribosomal protein S6--L-glutamate ligase. | Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily. | 0.502 |
SFR65956.1 | SFR85967.1 | SAMN05216203_2291 | SAMN05216203_3527 | Ribosomal protein S6--L-glutamate ligase. | Glutamate synthase (NADPH/NADH) large chain. | 0.682 |
SFR65956.1 | gshA | SAMN05216203_2291 | SAMN05216203_1751 | Ribosomal protein S6--L-glutamate ligase. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.485 |
SFR65962.1 | SFR65950.1 | SAMN05216203_2292 | SAMN05216203_2290 | Protein of unknown function. | Hypothetical protein. | 0.497 |
SFR65962.1 | SFR65956.1 | SAMN05216203_2292 | SAMN05216203_2291 | Protein of unknown function. | Ribosomal protein S6--L-glutamate ligase. | 0.511 |
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