STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR65956.1Ribosomal protein S6--L-glutamate ligase. (281 aa)    
Predicted Functional Partners:
SFR74490.1
Uncharacterized conserved protein.
 
     0.755
SFR77108.1
Uncharacterized conserved protein.
 
     0.685
SFR85967.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.682
SFR74508.1
Hypothetical protein.
 
     0.592
SFR63401.1
Predicted deacylase.
 
     0.585
SFR65950.1
Hypothetical protein.
       0.538
SFR65962.1
Protein of unknown function.
       0.511
SFR77904.1
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
    
 0.502
gshA
Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
 
 0.485
SFR41496.1
Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03.
    
 0.476
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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