STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR66249.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (224 aa)    
Predicted Functional Partners:
SFR66260.1
Hypothetical protein.
       0.564
SFR53672.1
Acyl carrier protein.
    
 0.555
SFR66239.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
  
  
 0.546
SFR86737.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
  0.503
SFR53289.1
Lipid kinase, YegS/Rv2252/BmrU family.
 
  
  0.499
SFR44997.1
Selenophosphate synthase.
 
    0.491
SFR78464.1
Hypothetical protein.
 
     0.461
SFR66270.1
2-haloacid dehalogenase.
       0.432
SFR54281.1
Phospholipid N-methyltransferase.
    
  0.426
SFR78450.1
Transferase 2, rSAM/selenodomain-associated.
 
   
 0.419
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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