STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR67320.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
SFR67309.1
Multidrug resistance protein, MATE family.
       0.559
SFR65859.1
Hypothetical protein.
  
     0.519
SFR48665.1
Cytochrome c oxidase cbb3-type subunit 4.
  
     0.515
SFR80771.1
Signal transduction histidine kinase.
  
     0.512
SFR49312.1
6-pyruvoyl-tetrahydropterin synthase.
  
     0.507
SFR44059.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.446
SFR62301.1
Putative ABC transport system permease protein.
 
     0.442
SFR84981.1
MSHA biogenesis protein MshN.
  
     0.414
SFR45008.1
Putative glycosyltransferase, TIGR04348 family.
  
     0.411
SFR48134.1
Outer membrane protein.
  
     0.408
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.