STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR67553.1Enoyl-CoA hydratase/carnithine racemase. (246 aa)    
Predicted Functional Partners:
SFR67108.1
PAS domain S-box-containing protein.
    
  0.950
SFR82148.1
PAS fold-containing protein.
    
  0.950
SFR75137.1
Two-component system, NarL family, sensor histidine kinase BarA.
    
  0.937
SFR40706.1
Na+/proline symporter.
    
 0.934
SFR59414.1
PAS domain S-box-containing protein.
    
  0.933
SFR64967.1
PAS domain S-box-containing protein.
    
  0.933
SFR44103.1
Signal transduction histidine kinase.
    
  0.909
SFR48570.1
Signal transduction histidine kinase.
    
  0.909
SFR51638.1
Signal transduction histidine kinase.
    
  0.909
SFR47861.1
Short chain enoyl-CoA hydratase.
  
  
  0.812
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.