Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR41960.1 | SFR43091.1 | SAMN05216203_0136 | SAMN05216203_0244 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.922 |
SFR41960.1 | SFR43213.1 | SAMN05216203_0136 | SAMN05216203_0257 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.829 |
SFR41960.1 | SFR62428.1 | SAMN05216203_0136 | SAMN05216203_1902 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.729 |
SFR41960.1 | SFR63462.1 | SAMN05216203_0136 | SAMN05216203_2005 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.976 |
SFR41960.1 | SFR63514.1 | SAMN05216203_0136 | SAMN05216203_2012 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Short chain enoyl-CoA hydratase. | 0.835 |
SFR41960.1 | SFR66051.1 | SAMN05216203_0136 | SAMN05216203_2305 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetoacetyl-CoA synthetase. | 0.819 |
SFR41960.1 | SFR68327.1 | SAMN05216203_0136 | SAMN05216203_2530 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase. | 0.831 |
SFR41960.1 | SFR68387.1 | SAMN05216203_0136 | SAMN05216203_2537 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.996 |
SFR41960.1 | SFR80292.1 | SAMN05216203_0136 | SAMN05216203_3064 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.833 |
SFR41960.1 | SFR81424.1 | SAMN05216203_0136 | SAMN05216203_3176 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.974 |
SFR43091.1 | SFR41960.1 | SAMN05216203_0244 | SAMN05216203_0136 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.922 |
SFR43091.1 | SFR43213.1 | SAMN05216203_0244 | SAMN05216203_0257 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.965 |
SFR43091.1 | SFR62428.1 | SAMN05216203_0244 | SAMN05216203_1902 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.922 |
SFR43091.1 | SFR63462.1 | SAMN05216203_0244 | SAMN05216203_2005 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | acyl-CoA dehydrogenase. | 0.514 |
SFR43091.1 | SFR63514.1 | SAMN05216203_0244 | SAMN05216203_2012 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Short chain enoyl-CoA hydratase. | 0.922 |
SFR43091.1 | SFR66051.1 | SAMN05216203_0244 | SAMN05216203_2305 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | acetoacetyl-CoA synthetase. | 0.770 |
SFR43091.1 | SFR68327.1 | SAMN05216203_0244 | SAMN05216203_2530 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase. | 0.922 |
SFR43091.1 | SFR68387.1 | SAMN05216203_0244 | SAMN05216203_2537 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.933 |
SFR43091.1 | SFR80292.1 | SAMN05216203_0244 | SAMN05216203_3064 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.922 |
SFR43091.1 | SFR81424.1 | SAMN05216203_0244 | SAMN05216203_3176 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | acyl-CoA dehydrogenase. | 0.514 |
page 1 of 6