STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR75826.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (254 aa)    
Predicted Functional Partners:
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
 
 0.952
SFR85967.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.762
SFR60690.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.741
SFR48117.1
butyryl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.738
SFR53672.1
Acyl carrier protein.
  
 0.715
SFR72984.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.681
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
    
  0.650
SFR85405.1
PhoP regulatory network protein YrbL.
    
  0.650
SFR75842.1
Antibiotic biosynthesis monooxygenase.
  
    0.627
SFR49117.1
[acyl-carrier-protein] S-malonyltransferase; Manually curated.
 
 0.623
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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