STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR76955.1Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. (526 aa)    
Predicted Functional Partners:
SFR76943.1
Membrane fusion protein, multidrug efflux system.
 
     0.930
SFR56489.1
Hypothetical protein.
  
 
 0.725
SFR82178.1
Membrane fusion protein, multidrug efflux system.
 
     0.690
SFR62481.1
Barrel-sandwich domain of CusB or HlyD membrane-fusion.
  
 
 0.612
SFR53672.1
Acyl carrier protein.
    
 0.596
SFR44697.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
  
   
 0.516
SFR76930.1
Transcriptional regulator, TetR family.
       0.501
SFR41542.1
Chorismate mutase.
   
 
 0.482
SFR45983.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.470
SFR63353.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
  
   
 0.458
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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