STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR82348.1beta-N-acetylglucosaminidase. (357 aa)    
Predicted Functional Partners:
SFR58502.1
PA14 domain-containing protein.
 
 
 0.720
SFR82487.1
Two-component system, LytT family, sensor histidine kinase AlgZ.
  
    0.624
SFR48046.1
Astacin (Peptidase family M12A).
  
  
  0.576
SFR43582.1
N-acetylglucosamine kinase.
  
 
 0.570
SFR44427.1
Hypothetical protein.
  
 
 0.527
SFR80387.1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
  
  
 0.484
SFR53418.1
Hypothetical protein.
    
 0.462
SFR45209.1
Cysteine-rich secretory protein family protein.
     
 0.454
SFR58052.1
Hypothetical protein.
  
  
 0.445
thiI
[ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
    0.414
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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